Registry clinical LABoratory Ontology

LABO is an ontology of informational entities formalizing clinical laboratory tests prescriptions and reporting documents.

Prefix: labo
Preferred Prefix: LABO
Keywords: obo ontology
Version: 2021-06-08
License: CC-BY-4.0
Links: Homepage Repository OWL
Contact: Paul Fabry 0000-0002-3336-2476 pfabry
Pattern for Local Unique Identifiers: Local identifiers in clinical LABoratory Ontology should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000124 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from clinical LABoratory Ontology should match this regular expression:
^LABO:\d{7}$
Example CURIE: LABO:0000124
Publications: 2019 LABO: An ontology for laboratory test prescription and reporting

Ontology

A summary of the relations in the Semantic Farm schema can be found here.

Depends On (6) (bioregistry.schema:0000017 ): IAO OBI OGMS OMIABIS OMRSE OPMI

Metaregistry clinical LABoratory Ontology

The metaregistry provides mappings between the Semantic Farm and other registries. There are 6 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`LABO`
BioPortal	`bioportal`	`LABO`
OBO Foundry	`obofoundry`	`labo`
OLS	`ols`	`labo`
OntoBee	`ontobee`	`LABO`
Wikidata (E)	`wikidata.entity`	`Q81661673`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/LABO_$1

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000124 is used to demonstrate the providers available for clinical LABoratory Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
clinical LABoratory Ontology	`labo`	http://purl.obolibrary.org/obo/LABO_0000124
clinical LABoratory Ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/LABO_0000124
Bioregistry	`bioregistry`	https://bioregistry.io/labo:0000124
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/LABO_0000124
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/labo/terms?iri=http://purl.obolibrary.org/obo/LABO_0000124
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/LABO/?p=classes&conceptid=http://purl.obolibrary.org/obo/LABO_0000124

Get the version:

>>> import bioregistry as br
>>> br.get_version("labo")
'2021-06-08'

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("labo")
'clinical LABoratory Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("labo")
'CC-BY-4.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("labo")
'https://github.com/OpenLHS/LABO'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("labo")
'https://github.com/OpenLHS/LABO'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("labo")
'http://purl.obolibrary.org/obo/labo.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("labo")
'Paul Fabry'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("labo")
'paul.fabry@usherbrooke.ca'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("labo")
'pfabry'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("labo")
'0000-0002-3336-2476'