IMGT, the international ImMunoGeneTics project, is a collection of high-quality integrated databases specialising in Immunoglobulins, T cell receptors and the Major Histocompatibility Complex (MHC) of all vertebrate species. IMGT/HLA is a database for sequences of the human MHC, referred to as HLA. It includes all the official sequences for the WHO Nomenclature Committee For Factors of the HLA System. This collection references allele information through the WHO nomenclature.

Prefix

imgt.hla

Alternative Prefixes

IPD-IMGT/HLA

Keywords

biomedical science dna immunogenetics immunology protein rna

Links

Homepage

Contact

Steven G. E. Marsh   0000-0003-2855-4120

Identifier Space Owner

European Bioinformatics Institute

Pattern for Local Unique Identifiers

Local identifiers in IMGT/HLA human major histocompatibility complex sequence database should match this regular expression:
^[A-Z0-9*:]+$

Example Local Unique Identifier

A*01:01:01:01   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from IMGT/HLA human major histocompatibility complex sequence database should match this regular expression:
^imgt\.hla:[A-Z0-9*:]+$

Example CURIE

imgt.hla:A*01:01:01:01

Publications

• 2020 IPD-IMGT/HLA Database
• 2014 The IPD and IMGT/HLA database: allele variant databases
• 2008 The IMGT/HLA database
• 2007 The IMGT/HLA database
• 2006 The IMGT/HLA and IPD databases
• 2006 IMGT/LIGM-DB, the IMGT comprehensive database of immunoglobulin and T cell receptor nucleotide sequences
• 2003 IMGT/HLA and IMGT/MHC: sequence databases for the study of the major histocompatibility complex
• 2001 IMGT/HLA Database--a sequence database for the human major histocompatibility complex
• 2000 IMGT/HLA database--a sequence database for the human major histocompatibility complex

A summary of the relations in the Semantic Farm schema can be found here.

In Collection

FHIR External Terminologies Synapse.org external links

The metaregistry provides mappings between the Semantic Farm and other registries. There are 11 mappings to external registries for this resource with 9 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier A*01:01:01:01 is used to demonstrate the providers available for IMGT/HLA human major histocompatibility complex sequence database. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.