The dictyBase database provides data on the model organism Dictyostelium discoideum and related species. It contains the complete genome sequence, ESTs, gene models and functional annotations. This collection references gene information.
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in Dictybase Gene should match this regular expression:
^DDB_G\d+$ - Example Local Unique Identifier
- DDB_G0267522 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Dictybase Gene should match this regular expression:
^dictybase\.gene:DDB_G\d+$ - Example CURIE
- dictybase.gene:DDB_G0267522
Contacts
- Contact
-
Petra Fey
0000-0002-4532-2703
pfey03
Mappings to External Registries
Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
DICTYBASE.GENE
|
|
Identifiers.org
|
miriam |
dictybase.gene
|
|
N2T
|
n2t |
dictybase.gene
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier DDB_G0267522 is used to demonstrate the providers
available for Dictybase Gene. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Dictybase Gene | dictybase.gene |
http://dictybase.org/gene/DDB_G0267522 |
| Bioregistry | bioregistry |
https://bioregistry.io/dictybase.gene:DDB_G0267522 |
| Identifiers.org | miriam |
https://identifiers.org/dictybase.gene:DDB_G0267522 |
| Name-to-Thing | n2t |
https://n2t.net/dictybase.gene:DDB_G0267522 |