Linked-data framework for connecting species in chemical kinetic reaction mechanisms with quantum calculations. A mechanism can be constructed from thermodynamic, reaction rate, and transport data that has been obtained either experimentally, computationally, or by a combination of both. In order to implement this approach, two existing ontologies, namely OntoKin, for representing chemical kinetic reaction mechanisms, and OntoCompChem, for representing quantum chemistry calculations, are extended. (from https://nfdi4cat.org/services/ontologie-sammlung/)
worldavatar.compchemA summary of the relations in the Semantic Farm schema can be found here.
Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
|
TIB-TS
|
tib |
ontocompchem
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier hasLumoPlusTwoEnergy is used to demonstrate the providers
available for Computational Chemistry Ontology. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| Computational Chemistry Ontology | worldavatar.compchem |
http://theworldavatar.com/ontology/ontocompchem/ontocompchem.owl#hasLumoPlusTwoEnergy |
| Bioregistry | bioregistry |
https://bioregistry.io/worldavatar.compchem:hasLumoPlusTwoEnergy |