VFDB is a repository of virulence factors (VFs) of pathogenic bacteria.This collection references VF genes.
- Prefix
vfdb.gene- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in VFDB Gene should match this regular expression:
^\w+$ - Example Local Unique Identifier
- VFG2154 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from VFDB Gene should match this regular expression:
^vfdb\.gene:\w+$ - Example CURIE
- vfdb.gene:VFG2154
Metaregistry VFDB Gene
The metaregistry provides mappings between the Semantic Farm and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
VFDB.GENE
|
|
Identifiers.org
|
miriam |
vfdb.gene
|
|
N2T
|
n2t |
vfdb.gene
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier VFG2154 is used to demonstrate the providers
available for VFDB Gene. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| VFDB Gene | vfdb.gene |
http://www.mgc.ac.cn/cgi-bin/VFs/gene.cgi?GeneID=VFG2154 |
| Bioregistry | bioregistry |
https://bioregistry.io/vfdb.gene:VFG2154 |
| Identifiers.org | miriam |
https://identifiers.org/vfdb.gene:VFG2154 |
| Name-to-Thing | n2t |
https://n2t.net/vfdb.gene:VFG2154 |