Registry UniProt Chain

This collection is a subset of UniProtKB that provides a means to reference the proteolytic cleavage products of a precursor protein.

Prefix: uniprot.chain
Alternative Prefixes: UPPRO
Links: Homepage Mailing List
Contact: Alex Bateman 0000-0002-6982-4660 bateman-research
Pattern for Local Unique Identifiers: Local identifiers in UniProt Chain should match this regular expression:
^PRO_[0-9]{10}$
Example Local Unique Identifier: PRO_0000016681 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from UniProt Chain should match this regular expression:
^uniprot\.chain:PRO_[0-9]{10}$
Example CURIE: uniprot.chain:PRO_0000016681

Metaregistry UniProt Chain

The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix	Curate
Identifiers.org	`miriam`	`uniprot.chain`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PRO_0000016681 is used to demonstrate the providers available for UniProt Chain. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
UniProt Chain	`uniprot.chain`	http://purl.uniprot.org/annotation/PRO_0000016681
Bioregistry	`bioregistry`	https://bioregistry.io/uniprot.chain:PRO_0000016681
Identifiers.org	`miriam`	https://identifiers.org/uniprot.chain:PRO_0000016681

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("UPPRO")
'uniprot.chain'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("uniprot.chain")
{'UPPRO'}

This name annotation was originally annotated in Identifiers.org and is redistributed under the CC BY 4.0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("uniprot.chain")
'UniProt Chain'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("uniprot.chain")
'https://www.uniprot.org'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("uniprot.chain")
'Alex Bateman'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("uniprot.chain")
'agb@ebi.ac.uk'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("uniprot.chain")
'bateman-research'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("uniprot.chain")
'0000-0002-6982-4660'