The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. The goal of the UM-BBD is to provide information on microbial enzyme-catalyzed reactions that are important for biotechnology. This collection refers to reaction information.
- Prefix
umbbd.reaction- Alternative Prefixes
- UM-BBD_reactionID
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in EAWAG Biocatalysis/Biodegradation Database reaction should match this regular expression:
^r\d+$ - Example Local Unique Identifier
- r0001 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from EAWAG Biocatalysis/Biodegradation Database reaction should match this regular expression:
^umbbd\.reaction:r\d+$ - Example CURIE
- umbbd.reaction:r0001
Metaregistry EAWAG Biocatalysis/Biodegradation Database reaction
The metaregistry provides mappings between the Semantic Farm and other registries. There are 5 mappings to external registries for this resource with 3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
UMBBD.REACTION
|
|
GO
|
go |
UM-BBD_reactionID
|
|
Identifiers.org
|
miriam |
umbbd.reaction
|
|
N2T
|
n2t |
umbbd.reaction
|
|
Wikidata (E)
|
wikidata.entity |
Q24188985
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier r0001 is used to demonstrate the providers
available for EAWAG Biocatalysis/Biodegradation Database reaction. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.