The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. The goal of the UM-BBD is to provide information on microbial enzyme-catalyzed reactions that are important for biotechnology. This collection refers to enzyme information.
- Prefix
umbbd.enzyme- Alternative Prefixes
- UM-BBD_enzymeID
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in EAWAG Biocatalysis/Biodegradation Database enzyme should match this regular expression:
^e\d+$ - Example Local Unique Identifier
- e0333 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from EAWAG Biocatalysis/Biodegradation Database enzyme should match this regular expression:
^umbbd\.enzyme:e\d+$ - Example CURIE
- umbbd.enzyme:e0333
Metaregistry EAWAG Biocatalysis/Biodegradation Database enzyme
The metaregistry provides mappings between the Semantic Farm and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
UMBBD.ENZYME
|
|
GO
|
go |
UM-BBD_enzymeID
|
|
Identifiers.org
|
miriam |
umbbd.enzyme
|
|
N2T
|
n2t |
umbbd.enzyme
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier e0333 is used to demonstrate the providers
available for EAWAG Biocatalysis/Biodegradation Database enzyme. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.