The tRNA Gene DataBase Curated by Experts "tRNADB-CE" was constructed by analyzing 927 complete and 1301 draft genomes of Bacteria and Archaea, 171 complete virus genomes, 121 complete chloroplast genomes, 12 complete eukaryote (Plant and Fungi) genomes and approximately 230 million DNA sequence entries that originated from environmental metagenomic clones.
This resource is proprietary. This means that it is not freely and publicly available without restriction. Such resources are still valuable to include in the Semantic Farm as they may appear in other non-proprietary resources.
Local identifiers in tRNA Gene Database should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from tRNA Gene Database should match
this regular expression:
^trnadbce:\d+$
The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Integbio
|
integbio |
nbdc00720
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 265912 is used to demonstrate the providers
available for tRNA Gene Database. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| tRNA Gene Database | trnadbce |
http://trna.nagahama-i-bio.ac.jp/cgi-bin/trnadb/whole_detail.cgi?SID=265912 |
| Bioregistry | bioregistry |
https://bioregistry.io/trnadbce:265912 |