Registry StreptomeDB

Suggest

Identifers for natural products isolated or mutasynthesized by bacteria of the genus Streptomyces.

Prefix: streptomedb
Links: Homepage Request Discussion
Publications: 2024 StreptomeDB 4.0: a comprehensive database of streptomycetes natural products enriched with protein interactions and interactive spectral visualization; 2020 StreptomeDB 3.0: an updated compendium of streptomycetes natural products; 2015 StreptomeDB 2.0--an extended resource of natural products produced by streptomycetes; 2012 StreptomeDB: a resource for natural compounds isolated from Streptomyces species

Identifier Standards

Pattern for Local Unique Identifiers: Local identifiers in StreptomeDB should match this regular expression:
^\d+$
Example Local Unique Identifier: 15753 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from StreptomeDB should match this regular expression:
^streptomedb:\d+$
Example CURIE: streptomedb:15753

Contacts

Contact: Stefan Günther 0000-0003-3744-189X
Contributors: submitter Mufaddal Naguthanawala 0009-0009-5240-7463 nagutm
Reviewer: Benjamin M. Gyori 0000-0001-9439-5346 bgyori

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 15753 is used to demonstrate the providers available for StreptomeDB. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
StreptomeDB	`streptomedb`	http://streptomedb.vm.uni-freiburg.de:8000/streptomedb/get_drugcard/15753
Bioregistry	`bioregistry`	https://bioregistry.io/streptomedb:15753

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("streptomedb")
'StreptomeDB'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("streptomedb")
'http://streptomedb.vm.uni-freiburg.de:8000/streptomedb'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("streptomedb")
'Stefan Günther'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("streptomedb")
'stefan.guenther@pharmazie.uni-freiburg.de'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("streptomedb")
'0000-0003-3744-189X'