The Signaling Pathways Project is an integrated 'omics knowledgebase based upon public, manually curated transcriptomic and cistromic (ChIP-Seq) datasets involving genetic and small molecule manipulations of cellular receptors, enzymes and transcription factors. Our goal is to create a resource where scientists can routinely generate research hypotheses or validate bench data relevant to cellular signaling pathways.

Prefix

spp

Keywords

chip-seq assay differential gene expression profiling enzyme expression data gene expression omics pathway prediction and recognition receptor regulation of gene expression signaling transcription factor transcriptomics

Links

Homepage

Publications

2019 The Signaling Pathways Project, an integrated 'omics knowledgebase for mammalian cellular signaling pathways

Pattern for Local Unique Identifiers

Local unique identifiers in Signaling Pathways Project should match this regular expression:
^10.\w{4}/\w{10}$

Example Local Unique Identifier

10.1621/vwN2g2HaX3   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Signaling Pathways Project should match this regular expression:
^spp:10.\w{4}/\w{10}$

Example CURIE

spp:10.1621/vwN2g2HaX3

Contact

Neil McKenna   0000-0001-6689-0104

Identifier Space Owner

Baylor College of Medicine

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 10.1621/vwN2g2HaX3 is used to demonstrate the providers available for Signaling Pathways Project. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.