SpliceNest [1] is a web based graphical tool to explore gene structure, including alternative splicing, based on a mapping on the EST consensus sequences (contigs) from GeneNest [2] to the complete human genome.
- Comment
This resource doesn't exist on the web anymore
- Prefix
splicenest- Keywords
- dna gene genome
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- Hs635 Resolve
- Example CURIE
- splicenest:Hs635
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry SpliceNest
The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Prefix Commons
|
prefixcommons |
splicenest
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier Hs635 is used to demonstrate the providers
available for SpliceNest. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| SpliceNest | splicenest |
http://splicenest.molgen.mpg.de/cgi-bin/splicegraph.cgi?cluster=Hs635 |
| Bioregistry | bioregistry |
https://bioregistry.io/splicenest:Hs635 |
Extra Providers
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/splicenest:Hs635 |