Stress Knowledge Map (SKM, available at https://skm.nib.si) is a knowledge graph resulting from the integration of dispersed published information on plant molecular responses to biotic and abiotic stressors.

Prefix

skm

Keywords

gene metabolite molecular interaction network analysis plant physiology plant resistance plant-pathogen interaction protein interactions ribonucleic acid signaling

Links

Homepage

Publications

2018 Network Modeling Unravels Mechanisms of Crosstalk between Ethylene and Salicylate Signaling in Potato

2024 Stress Knowledge Map: A knowledge graph resource for systems biology analysis of plant stress responses

Pattern for Local Unique Identifiers

Local unique identifiers in Stress Knowledge Map should match this regular expression:
^(rx|fc)[0-9]{5}$

Example Local Unique Identifier

rx00408   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Stress Knowledge Map should match this regular expression:
^skm:(rx|fc)[0-9]{5}$

Example CURIE

skm:rx00408

Contact

Carissa Bleker   0000-0003-1617-7145

Identifier Space Owner

National Institute of Biology

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 2 mappings to external registries with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier rx00408 is used to demonstrate the providers available for Stress Knowledge Map. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.