This is a dot notation used to concisely describe a SCOP(e) class, fold, superfamily, and family. For example, a.39.1.1 references the 'Calbindin D9K' family, where 'a' represents the class, '39' represents the fold, '1' represents the superfamily, and the last '1' represents the family.
- Prefix
scop.sccs- Links
- Homepage
- References
- Other https://scop.berkeley.edu/help/#stableidentifiers
Identifier Standards
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifiers
-
a.39.1.1
Resolve
a Resolve
a.39 Resolve
a.39.1 Resolve - Example CURIEs
-
scop.sccs:a.39.1.1
scop.sccs:a
scop.sccs:a.39
scop.sccs:a.39.1
Contacts
- Contact
-
John-Marc Chandonia
0000-0002-5153-9079
jmchandonia
- Contributors
-
submitter
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Mappings to External Registries
Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
EDAM
|
edam |
1041
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier a.39.1.1 is used to demonstrate the providers
available for SCOP(e) concise classification string. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| SCOP(e) concise classification string | scop.sccs |
http://scop.berkeley.edu/sccs=a.39.1.1 |
| Bioregistry | bioregistry |
https://bioregistry.io/scop.sccs:a.39.1.1 |