This database is a collection of protein-protein homo- and hetero-complexes as well as domain-domain structures. This issue of the database contains 17.024 entries (as of October 2007) of which 1350 are two-chain protein hetero-complexes, 7773 homodimers and 1589 are one-chain proteins parsed into two domains (domain structures).
- Comment
This resource doesn't exist on the web anymore
- Prefix
protcom- Keywords
- protein structure
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- 12e8LH Resolve
- Example CURIE
- protcom:12e8LH
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry Database of protein-protein complexes
The metaregistry provides mappings between the Semantic Farm and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Pathguide
|
pathguide |
242
|
|
Prefix Commons
|
prefixcommons |
protcom
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 12e8LH is used to demonstrate the providers
available for Database of protein-protein complexes. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Database of protein-protein complexes | protcom |
http://www.ces.clemson.edu/compbio/protcom/print_file.cgi?pdbid=12e8LH |
| Bioregistry | bioregistry |
https://bioregistry.io/protcom:12e8LH |
Extra Providers
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/protcom:12e8LH |