PathoPlant® is a database on plant-pathogen interactions and components of signal transduction pathways related to plant pathogenesis. PathoPlant® also harbors gene expression data from Arabidopsis thaliana microarray experiments to enable searching for specific genes regulated upon pathogen infection or elicitor treatment.
- Prefix
pathoplant- Keywords
- gene expression interaction pathway protein small molecule
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- MO000027 Resolve
- Example CURIE
- pathoplant:MO000027
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry PathoPlant®
The metaregistry provides mappings between the Semantic Farm and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Pathguide
|
pathguide |
333
|
|
Prefix Commons
|
prefixcommons |
pathoplant
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier MO000027 is used to demonstrate the providers
available for PathoPlant®. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| PathoPlant® | pathoplant |
http://www.pathoplant.de/detail.php?accNo=MO000027 |
| Bioregistry | bioregistry |
https://bioregistry.io/pathoplant:MO000027 |
Extra Providers
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/pathoplant:MO000027 |