Oryza Tag Line is a database that was developed to collect information generated from the characterization of rice (Oryza sativa L cv. Nipponbare) insertion lines resulting in potential gene disruptions. It collates morpho-physiological alterations observed during field evaluation, with each insertion line documented through a generic passport data including production records, seed stocks and FST information.

Prefix

otl

Keywords

cdna deoxyribonucleic acid dna dna sequence expression data life science mrna phenotype

Links

Homepage

Publications

2007 Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library

Pattern for Local Unique Identifiers

Local unique identifiers in Oryza Tag Line should match this regular expression:
^A[A-Z]+\d+$

Example Local Unique Identifier

AADB12   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Oryza Tag Line should match this regular expression:
^otl:A[A-Z]+\d+$

Example CURIE

otl:AADB12

Contact

Emmanuel Guiderdoni   0000-0003-2760-2864

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 5 mappings to external registries with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier AADB12 is used to demonstrate the providers available for Oryza Tag Line. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.