OriDB is a database of collated genome-wide mapping studies of confirmed and predicted replication origin sites in Saccharomyces cerevisiae and the fission yeast Schizosaccharomyces pombe. This collection references Saccharomyces cerevisiae.
- Prefix
oridb.sacch- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in OriDB Saccharomyces should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 1 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from OriDB Saccharomyces should match this regular expression:
^oridb\.sacch:\d+$ - Example CURIE
- oridb.sacch:1
Metaregistry OriDB Saccharomyces
The metaregistry provides mappings between the Semantic Farm and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
ORIDB.SACCH
|
|
Identifiers.org
|
miriam |
oridb.sacch
|
|
N2T
|
n2t |
oridb.sacch
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 1 is used to demonstrate the providers
available for OriDB Saccharomyces. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| OriDB Saccharomyces | oridb.sacch |
http://cerevisiae.oridb.org/details.php?id=1 |
| Bioregistry | bioregistry |
https://bioregistry.io/oridb.sacch:1 |
| Identifiers.org | miriam |
https://identifiers.org/oridb.sacch:1 |
| Name-to-Thing | n2t |
https://n2t.net/oridb.sacch:1 |