NeuronDB provides a dynamically searchable database of three types of neuronal properties: voltage gated conductances, neurotransmitter receptors, and neurotransmitter substances. It contains tools that provide for integration of these properties in a given type of neuron and compartment, and for comparison of properties across different types of neurons and compartments.
neurondb
Local identifiers in NeuronDB should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from NeuronDB should match
this regular expression:
^neurondb:\d+$
The metaregistry provides mappings between the Semantic Farm and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
NEURONDB
|
|
|
EDAM
|
edam |
2656
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.45a10e
|
|
Identifiers.org
|
miriam |
neurondb
|
|
N2T
|
n2t |
neurondb
|
|
|
Prefix Commons
|
prefixcommons |
neurondb
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 265 is used to demonstrate the providers
available for NeuronDB. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| NeuronDB | neurondb |
http://senselab.med.yale.edu/NeuronDB/NeuronProp.aspx?id=265 |
| Bioregistry | bioregistry |
https://bioregistry.io/neurondb:265 |
| Identifiers.org | miriam |
https://identifiers.org/neurondb:265 |
| Name-to-Thing | n2t |
https://n2t.net/neurondb:265 |
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/neurondb:265 |