NeuronDB provides a dynamically searchable database of three types of neuronal properties: voltage gated conductances, neurotransmitter receptors, and neurotransmitter substances. It contains tools that provide for integration of these properties in a given type of neuron and compartment, and for comparison of properties across different types of neurons and compartments.
Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 5 mappings to external registries with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
NEURONDB
|
|
|
EDAM
|
edam |
2656
|
|
Identifiers.org
|
miriam |
neurondb
|
|
N2T
|
n2t |
neurondb
|
|
|
Prefix Commons
|
prefixcommons |
neurondb
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 265 is used to demonstrate the providers
available for NeuronDB. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| NeuronDB | neurondb |
http://senselab.med.yale.edu/NeuronDB/NeuronProp.aspx?id=265 |
| Bioregistry | bioregistry |
https://bioregistry.io/neurondb:265 |
| Identifiers.org | miriam |
https://identifiers.org/neurondb:265 |
| Name-to-Thing | n2t |
https://n2t.net/neurondb:265 |
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/neurondb:265 |