ModelDB is a curated, searchable database of published models in the computational neuroscience domain. It accommodates models expressed in textual form, including procedural or declarative languages (e.g. C++, XML dialects) and source code written for any simulation environment.

Prefix

modeldb

Keywords

computational biology life science neurobiology

Links

Homepage

Contact

Perry Miller   0000-0002-5176-943X

Pattern for Local Unique Identifiers

Local identifiers in ModelDB should match this regular expression:
^\d+$

Example Local Unique Identifier

45539   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ModelDB should match this regular expression:
^modeldb:\d+$

Example CURIE

modeldb:45539

Publications

• 1996 ModelDB: an environment for running and storing computational models and their results applied to neuroscience
• 2016 Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience
• 2004 ModelDB: A Database to Support Computational Neuroscience
• 2003 ModelDB: making models publicly accessible to support computational neuroscience
• ModelDB: making models publicly accessible to support computational neuroscience.
• ModelDB: A Database to Support Computational Neuroscience.

The metaregistry provides mappings between the Semantic Farm and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 45539 is used to demonstrate the providers available for ModelDB. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.