The miRBase database is a searchable database of published miRNA sequences and annotation. Each entry in the miRBase Sequence database represents a predicted hairpin portion of a miRNA transcript (termed mir in the database), with information on the location and sequence of the mature miRNA sequence (termed miR). Both hairpin and mature sequences are available for searching and browsing, and entries can also be retrieved by name, keyword, references and annotation. All sequence and annotation data are also available for download.
- Prefix
mirbase.family- Alternative Prefixes
- MIRBASE_FAMILY
- Keywords
- gene mirna
- License
- public domain
- Links
- Homepage
- Contact
- Sam Griffiths-Jones 0000-0001-6043-807X samgriffithsjones
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- MIPF0000002 Resolve
- Example CURIE
- mirbase.family:MIPF0000002
- Contributors
-
- submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry miRBase Families
The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Wikidata (E)
|
wikidata.entity |
Q6826947
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier MIPF0000002 is used to demonstrate the providers
available for miRBase Families. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| miRBase Families | mirbase.family |
http://www.mirbase.org/cgi-bin/mirna_summary.pl?fam=MIPF0000002 |
| Bioregistry | bioregistry |
https://bioregistry.io/mirbase.family:MIPF0000002 |