The free-to-use MGnify platform provides assembly, analysis and archiving of microbiome-derived nucleic acid sequence data from a wide range of biomes, with analysis results providing taxonomic and functional profiles. The platform also includes MGnify Proteins, a database of protein sequences derived from the analysis of metagenomic assemblies, and MGnify Genomes, a resource of biome-specific catalogues of microbial genomes, including extensive functional annotations.
mgnifyprotein
Local identifiers in MGnify Protein should match this
regular expression:
^MGYP\d{12}$
Compact URIs (CURIEs) constructed from MGnify Protein should match
this regular expression:
^mgnifyprotein:MGYP\d{12}$
The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Identifiers.org
|
miriam |
mgnify.protein
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier MGYP000261684433 is used to demonstrate the providers
available for MGnify Protein. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| MGnify Protein | mgnifyprotein |
https://www.ebi.ac.uk/metagenomics/proteins/MGYP000261684433 |
| Bioregistry | bioregistry |
https://bioregistry.io/mgnifyprotein:MGYP000261684433 |
| Identifiers.org | miriam |
https://identifiers.org/mgnify.protein:MGYP000261684433 |