MetaNetX/MNXref integrates various information from genome-scale metabolic network reconstructions such as information on reactions, metabolites and compartments. This information undergoes a reconciliation process to minimise for discrepancies between different data sources, and makes the data accessible under a common namespace. This collection references chemical or metabolic components.

Prefix

metanetx.chemical

Links

Homepage

Pattern for Local Unique Identifiers

Local unique identifiers in MetaNetX chemical should match this regular expression:
^(MNXM\d+|BIOMASS|WATER)$

Example Local Unique Identifier

MNXM1723   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from MetaNetX chemical should match this regular expression:
^metanetx\.chemical:(MNXM\d+|BIOMASS|WATER)$

Example CURIE

metanetx.chemical:MNXM1723

Contact

Missing Contact

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MNXM1723 is used to demonstrate the providers available for MetaNetX chemical. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.