LncBook accommodates a high-quality collection of human lncRNA genes and transcripts, and incorporates their abundant annotations at different omics levels, thereby enabling users to decipher functional signatures of lncRNAs in human diseases and different biological contexts.

Prefix

lncbook

Keywords

biocuration curated information expression expression data gene expression gene functional annotation gene-disease association genetic variation genome/gene health/disease interaction/pathway lncrna long non-coding ribonucleic acid methylation mirna nucleic acid sequence omics rna sequence snp

Links

Homepage

Publications

2023 LncBook 2.0: integrating human long non-coding RNAs with multi-omics annotations

2018 LncBook: a curated knowledgebase of human long non-coding RNAs

2014 LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs

Pattern for Local Unique Identifiers

Local unique identifiers in LncBook should match this regular expression:
^HSALNG\d{7}$

Example Local Unique Identifier

HSALNG0006197   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from LncBook should match this regular expression:
^lncbook:HSALNG\d{7}$

Example CURIE

lncbook:HSALNG0006197

Contact

Missing Contact

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier HSALNG0006197 is used to demonstrate the providers available for LncBook. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.