KnetMiner is a knowledge graph platform for evidence-based gene discovery and complex trait analysis across plants, crops and other species. It integrates genome annotations, orthology, pathways, protein interactions, gene expression, phenotypes, GWAS results and the published literature into a single knowledge graph, and publishes a gene page for every gene it holds. Identifiers in this namespace resolve to the KnetMiner gene page for a given gene in a given species, showing that gene's network context, traits, functional annotations, orthologs and supporting literature evidence.

Prefix

knetminer

Links

Homepage

Pattern for Local Unique Identifiers

Local identifiers in KnetMiner should match this regular expression:
^[a-z0-9_]+/[A-Za-z0-9._-]+$

Example Local Unique Identifier

triticum_aestivum/TRAESCS5D02G004100   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from KnetMiner should match this regular expression:
^knetminer:[a-z0-9_]+/[A-Za-z0-9._-]+$

Example CURIE

knetminer:triticum_aestivum/TRAESCS5D02G004100

Contact

Missing Contact

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier triticum_aestivum/TRAESCS5D02G004100 is used to demonstrate the providers available for KnetMiner. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.