IDEAL provides a collection of knowledge on experimentally verified intrinsically disordered proteins. It contains manual annotations by curators on intrinsically disordered regions, interaction regions to other molecules, post-translational modification sites, references and structural domain assignments.

Prefix

ideal

Keywords

3d structure biology family and domain databases image/movie interaction/pathway intrinsically disordered proteins molecular interaction ordered regions in proteins post-translational protein modification protein

Links

Homepage

Publications

2013 IDEAL in 2014 illustrates interaction networks composed of intrinsically disordered proteins and their binding partners

https://bioregistry.io/pubmed:22067451

Pattern for Local Unique Identifiers

Local unique identifiers in Intrinsically Disordered proteins with Extensive Annotations and Literature should match this regular expression:
^IID\d+$

Example Local Unique Identifier

IID00001   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Intrinsically Disordered proteins with Extensive Annotations and Literature should match this regular expression:
^ideal:IID\d+$

Example CURIE

ideal:IID00001

Contact

Satoshi Fukuchi   0000-0002-5705-3061   sfukuchi

Identifier Space Owner

Nagoya University

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 7 mappings to external registries with 5 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier IID00001 is used to demonstrate the providers available for Intrinsically Disordered proteins with Extensive Annotations and Literature. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.