ICEberg (Integrative and conjugative elements) is a database of integrative and conjugative elements (ICEs) found in bacteria. ICEs are conjugative self-transmissible elements that can integrate into and excise from a host chromosome, and can carry likely virulence determinants, antibiotic-resistant factors and/or genes coding for other beneficial traits. It contains details of ICEs found in representatives bacterial species, and which are organised as families. This collection references ICE families.

Prefix

iceberg.family

Links

Homepage

Contact

Hong-Yu Ou   0000-0001-9439-1660

Pattern for Local Unique Identifiers

Local identifiers in ICEberg family should match this regular expression:
^\d+$

Example Local Unique Identifier

1   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ICEberg family should match this regular expression:
^iceberg\.family:\d+$

Example CURIE

iceberg.family:1

Publications

• 2019 ICEberg 2.0: an updated database of bacterial integrative and conjugative elements
• 2011 ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria

The metaregistry provides mappings between the Semantic Farm and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1 is used to demonstrate the providers available for ICEberg family. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.