The HuBMAP dataset collection provides high resolution molecular data from human tissues, with unique identifiers that enable tracking, citation, and integration of datasets across diverse assay types and donor samples for biomedical research.

Prefix
hubmap.dataset
Links
Homepage Request Discussion
Contact
Katy Börner   0000-0002-3321-6137   katyb
Pattern for Local Unique Identifiers

Local identifiers in Human BioMolecular Atlas Program Dataset should match this regular expression:
^[a-f0-9]{32}$

Example Local Unique Identifier
4bbe3b53a985e999eb66fee3297ec3f8   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human BioMolecular Atlas Program Dataset should match this regular expression:
^hubmap\.dataset:[a-f0-9]{32}$

Example CURIE
hubmap.dataset:4bbe3b53a985e999eb66fee3297ec3f8
Publications
2025 Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage
Contributors
Reviewer
Benjamin M. Gyori   0000-0001-9439-5346   bgyori
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 4bbe3b53a985e999eb66fee3297ec3f8 is used to demonstrate the providers available for Human BioMolecular Atlas Program Dataset. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name Metaprefix URI
Human BioMolecular Atlas Program Dataset hubmap.dataset https://portal.hubmapconsortium.org/browse/dataset/4bbe3b53a985e999eb66fee3297ec3f8
Bioregistry bioregistry https://bioregistry.io/hubmap.dataset:4bbe3b53a985e999eb66fee3297ec3f8