The HuBMAP dataset collection provides high resolution molecular data from human tissues, with unique identifiers that enable tracking, citation, and integration of datasets across diverse assay types and donor samples for biomedical research.

Prefix

hubmap.dataset

Links

Homepage Request Discussion

Publications

2025 Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage

Pattern for Local Unique Identifiers

Local unique identifiers in Human BioMolecular Atlas Program Dataset should match this regular expression:
^[a-f0-9]{32}$

Example Local Unique Identifier

4bbe3b53a985e999eb66fee3297ec3f8   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Human BioMolecular Atlas Program Dataset should match this regular expression:
^hubmap\.dataset:[a-f0-9]{32}$

Example CURIE

hubmap.dataset:4bbe3b53a985e999eb66fee3297ec3f8

Contact

Katy Börner   0000-0002-3321-6137   katyb

Contributor

creator Nalika Palayoor   0009-0008-8406-631X   nalikapalayoor

Reviewer

Benjamin M. Gyori   0000-0001-9439-5346   bgyori

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 4bbe3b53a985e999eb66fee3297ec3f8 is used to demonstrate the providers available for Human BioMolecular Atlas Program Dataset. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.