Registry Human BioMolecular Atlas Program Collection

The collections section of HuBMAP groups related datasets, samples, and metadata into organized categories. Each collection has a unique identifier that links it to its constituent datasets.

Prefix
hubmap.collection
Links
Homepage Request Discussion
Contact
Katy Börner   0000-0002-3321-6137   katyb
Pattern for Local Unique Identifiers

Local identifiers in Human BioMolecular Atlas Program Collection should match this regular expression:
^[a-f0-9]{32}$

Example Local Unique Identifier
3ae4ddfc175d768af5526a010bfe95aa   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human BioMolecular Atlas Program Collection should match this regular expression:
^hubmap\.collection:[a-f0-9]{32}$

Example CURIE
hubmap.collection:3ae4ddfc175d768af5526a010bfe95aa
Publications
2025 Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage
Contributors
Reviewer
Benjamin M. Gyori   0000-0001-9439-5346   bgyori
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 3ae4ddfc175d768af5526a010bfe95aa is used to demonstrate the providers available for Human BioMolecular Atlas Program Collection. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name Metaprefix URI
Human BioMolecular Atlas Program Collection hubmap.collection https://portal.hubmapconsortium.org/browse/collection/3ae4ddfc175d768af5526a010bfe95aa
Bioregistry bioregistry https://bioregistry.io/hubmap.collection:3ae4ddfc175d768af5526a010bfe95aa