The Human Protein Reference Database (HPRD) represents a centralized platform to visually depict and integrate information pertaining to domain architecture, post-translational modifications, interaction networks and disease association for each protein in the human proteome.
hprd
Local identifiers in Human Protein Reference Database should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Human Protein Reference Database should match
this regular expression:
^hprd:\d+$
The metaregistry provides mappings between the Semantic Farm and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
HPRD
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.y2qws7
|
|
Integbio
|
integbio |
nbdc00103
|
|
Identifiers.org
|
miriam |
hprd
|
|
N2T
|
n2t |
hprd
|
|
Pathguide
|
pathguide |
14
|
|
|
Prefix Commons
|
prefixcommons |
hprd
|
|
re3data
|
re3data |
r3d100010978
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 00001 is used to demonstrate the providers
available for Human Protein Reference Database. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Human Protein Reference Database | hprd |
http://www.hprd.org/protein/00001 |
| Bioregistry | bioregistry |
https://bioregistry.io/hprd:00001 |
| Identifiers.org | miriam |
https://identifiers.org/hprd:00001 |
| Name-to-Thing | n2t |
https://n2t.net/hprd:00001 |
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/hprd:00001 |