Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This datatype refers to proteins in Gramene.

Prefix

gramene.protein

Alternative Prefixes

GR_PROTEIN

Links

Homepage

Pattern for Local Unique Identifiers

Local unique identifiers in Gramene protein should match this regular expression:
^\d+$

Example Local Unique Identifier

78073   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Gramene protein should match this regular expression:
^gramene\.protein:\d+$

Example CURIE

gramene.protein:78073

Contact

Missing Contact

Identifier Space Owner

Cold Spring Harbor Laboratory

A summary of the relations in the Semantic Farm schema can be found here.

In Collection (1)

Synapse.org external links

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 4 mappings to external registries with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 78073 is used to demonstrate the providers available for Gramene protein. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.