GenAtlas is a database containing information on human genes, markers and phenotypes.
genatlas
Local identifiers in Genatlas should match this
regular expression:
^\w+$
Compact URIs (CURIEs) constructed from Genatlas should match
this regular expression:
^genatlas:\w+$
The metaregistry provides mappings between the Semantic Farm and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
GENATLAS
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.pmg2vd
|
|
Integbio
|
integbio |
nbdc00275
|
|
Identifiers.org
|
miriam |
genatlas
|
|
N2T
|
n2t |
genatlas
|
|
|
Prefix Commons
|
prefixcommons |
genatlas
|
|
|
UniProt
|
uniprot |
DB-0027
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier HBB is used to demonstrate the providers
available for Genatlas. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Genatlas | genatlas |
http://genatlas.medecine.univ-paris5.fr/fiche.php?symbol=HBB |
| Bioregistry | bioregistry |
https://bioregistry.io/genatlas:HBB |
| Identifiers.org | miriam |
https://identifiers.org/genatlas:HBB |
| Name-to-Thing | n2t |
https://n2t.net/genatlas:HBB |
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/genatlas:HBB |