Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references yeast.

Prefix

funcbase.yeast

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in FuncBase Yeast should match this regular expression:
^\d+$

Example Local Unique Identifier

2701   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from FuncBase Yeast should match this regular expression:
^funcbase\.yeast:\d+$

Example CURIE

funcbase.yeast:2701

The metaregistry provides mappings between the Semantic Farm and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 2701 is used to demonstrate the providers available for FuncBase Yeast. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.