The EMI ontology is used to structure spectrum annotation provenance by reusing the PROV-O ontology (a W3C recommendation) and sample and observation data by applying the SOSA ontology. EMI reuses the SOSA ontology as a data schema for struturing the Sample and Observation data. SOSA (Sensor, Observation, Sample, and Actuator) is a subset of SSN (Semantic Sensor Network Ontology) that is a W3C recommendation. [from homepage]
- Prefix
emi- Keywords
- ontology
- Version
- 1.0
- License
- CC0-1.0
- Links
- Homepage Repository OWL RDF Request Discussion
- Contact
- Tarcisio Mendes de Farias 0000-0002-3175-5372 tarcisiotmf
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- ChemicalStructure Resolve
- Example CURIE
- emi:ChemicalStructure
- Contributors
-
- submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Ontology
A summary of the relations in the Semantic Farm schema can be found here.
- In Collection
- Biocuration Conference 2025 Collection
Metaregistry Earth Metabolome Ontology
The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
OLS
|
ols |
emi
|
RDF Information
When using this resource in RDF, the following URI format should be used:
https://purl.org/emi#$1
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier ChemicalStructure is used to demonstrate the providers
available for Earth Metabolome Ontology. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.