An ontology for mouse anatomy covering embryonic development and postnatal stages.

Prefix

emapa

Preferred Prefix

EMAPA

Alternative Prefixes

EMAPA_RETIRED

Keywords

anatomy animal organ development bioinformatics developmental biology gene expression obo ontology

Version

2023-11-14

License

CC-BY-4.0

Links

Homepage Repository OBO OWL

Contact

Terry Hayamizu   0000-0002-0956-8634   tfhayamizu

Pattern for Local Unique Identifiers

Local identifiers in Mouse Developmental Anatomy Ontology should match this regular expression:
^\d+$

Example Local Unique Identifier

26753   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Mouse Developmental Anatomy Ontology should match this regular expression:
^EMAPA:\d+$

Example CURIE

EMAPA:26753

Publications

• 1998 An internet-accessible database of mouse developmental anatomy based on a systematic nomenclature
• 2015 Mouse anatomy ontologies: enhancements and tools for exploring and integrating biomedical data
• 2013 EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update
• 2016 Textual Anatomics

The metaregistry provides mappings between the Semantic Farm and other registries. There are 10 mappings to external registries for this resource with 4 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/EMAPA_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 26753 is used to demonstrate the providers available for Mouse Developmental Anatomy Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.