The DrugBank database is a bioinformatics and chemoinformatics resource that combines detailed drug (i.e. chemical, pharmacological and pharmaceutical) data with comprehensive drug target (i.e. sequence, structure, and pathway) information. This collection references drug information.
drugbank
Local identifiers in DrugBank should match this
regular expression:
^DB\d{5}$
Compact URIs (CURIEs) constructed from DrugBank should match
this regular expression:
^drugbank:DB\d{5}$
A summary of the relations in the Semantic Farm schema can be found here.
The metaregistry provides mappings between the Semantic Farm and other registries. There are 16 mappings to external registries for this resource with 11 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
|
BARTOC
|
bartoc |
18377
|
|
| BioContext | biocontext |
DrugBank
|
|
Cellosaurus
|
cellosaurus |
DrugBank
|
|
| CHEMINF | cheminf |
000406
|
|
|
EDAM
|
edam |
2326
|
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.353yat
|
|
Integbio
|
integbio |
nbdc01071
|
|
Identifiers.org
|
miriam |
drugbank
|
|
N2T
|
n2t |
drugbank
|
|
Pathguide
|
pathguide |
221
|
|
|
Prefix Commons
|
prefixcommons |
drugbank
|
|
re3data
|
re3data |
r3d100010544
|
|
| TogoID | togoid |
Drugbank
|
|
|
UniProt
|
uniprot |
DB-0019
|
|
|
Wikidata
|
wikidata |
P715
|
|
|
Wikidata (E)
|
wikidata.entity |
Q1122544
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier DB14938 is used to demonstrate the providers
available for DrugBank. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| DrugBank | drugbank |
https://go.drugbank.com/drugs/DB14938 |
| Bioregistry | bioregistry |
https://bioregistry.io/drugbank:DB14938 |
| Identifiers.org | miriam |
https://identifiers.org/drugbank:DB14938 |
| Name-to-Thing | n2t |
https://n2t.net/drugbank:DB14938 |
Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/drugbank:DB14938 |