Cell lines used in the Dependency Map (DepMap). Highly related to CCLE Cells.
- Prefix
depmap- Keywords
- cancer cell line cell cell line
- License
- CC-BY-4.0
- Links
- Homepage
- Contact
- Francisca Vazquez 0000-0002-2857-4685
- Pattern for Local Unique Identifiers
-
Local identifiers in DepMap Cell Lines should match this regular expression:
^ACH-\d+$ - Example Local Unique Identifier
- ACH-000001 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from DepMap Cell Lines should match this regular expression:
^depmap:ACH-\d+$ - Example CURIE
- depmap:ACH-000001
- Publications
- 2025 The present and future of the Cancer Dependency Map
- Contributors
-
- submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Ontology
A summary of the relations in the Semantic Farm schema can be found here.
- In Collection
- Synapse.org external links
Metaregistry DepMap Cell Lines
The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Cellosaurus
|
cellosaurus |
DepMap
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier ACH-000001 is used to demonstrate the providers
available for DepMap Cell Lines. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| DepMap Cell Lines | depmap |
https://depmap.org/portal/cell_line/ACH-000001 |
| Bioregistry | bioregistry |
https://bioregistry.io/depmap:ACH-000001 |