Identifiers represent antimicrobial peptides in the Database of Antimicrobial Peptides (dbAMP) which is an open-access, manually curated database of antimicrobial peptides (AMPs).

Prefix

dbamp

Keywords

3d structure antimicrobial peptides drug health/disease interaction/pathway protein sequence

Links

Homepage Request Discussion

Publications

2025 ABPDB: a Database of Antibacterial Peptides

2025 dbAMP 3.0: updated resource of antimicrobial activity and structural annotation of peptides in the post-pandemic era

2022 dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data

2019 dbAMP: an integrated resource for exploring antimicrobial peptides with functional activities and physicochemical properties on transcriptome and proteome data

Pattern for Local Unique Identifiers

Local identifiers in Database of Anti-Microbial Peptides should match this regular expression:
^\d{5}$

Example Local Unique Identifier

28463   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Database of Anti-Microbial Peptides should match this regular expression:
^dbamp:\d{5}$

Example CURIE

dbamp:28463

Namespace Embedded in LUI

This resource has been annotated by the Semantic Farm as having a potential namespace embedded in LUI. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For , the banana looks like dbAMP_. Therefore, you may see local unique identifiers for this resource that look like dbAMP_28463 (instead of the canonical form 28463) and CURIEs for this resource that look like dbamp:dbAMP_28463 (instead of the canonical form dbamp:28463). The Semantic Farm will automatically strip off the banana when standardizing local unique identifiers and CURIEs.

Contact

Tzong-Yi Lee   0000-0001-8475-7868

Contributors

submitter Kangho Ji   0009-0009-3402-8013   kanghosaeyo

Reviewer

Benjamin M. Gyori   0000-0001-9439-5346   bgyori

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 28463 is used to demonstrate the providers available for Database of Anti-Microbial Peptides. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.