Registry Contextual Ontology-based Repository Analysis Library - Context and Measurement Ontology

The Context and Measurement Ontology (COMO) contains ontological terms to describe the context for various types of experimental data and measurements. It is useful in its current state for several different environmental microbiology projects. This ontology is used in multiple CORAL (Contextual Ontology-based Repository Analysis Library) deployments.

Prefix

coral.como

Keywords

ontology

License

AGPL-3.0-only

Links

Homepage Repository OBO Request Discussion

Contact

John-Marc Chandonia 0000-0002-5153-9079 jmchandonia

Pattern for Local Unique Identifiers

Local identifiers in Contextual Ontology-based Repository Analysis Library - Context and Measurement Ontology should match this regular expression:
^\d+$

Example Local Unique Identifier

0000001

Pattern for CURIES

Compact URIs (CURIEs) constructed from Contextual Ontology-based Repository Analysis Library - Context and Measurement Ontology should match this regular expression:
^coral\.como:\d+$

Example CURIE

coral.como:0000001

Publications

2022 CORAL: A framework for rigorous self-validated data modeling and integrative, reproducible data analysis

Contributors

submitter John-Marc Chandonia 0000-0002-5153-9079 jmchandonia

Reviewer

Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

This resource does not have any providers. Please consider contributing one after reading the curation guide.

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("coral.como")
'Contextual Ontology-based Repository Analysis Library - Context and Measurement Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("coral.como")
'AGPL-3.0-only'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("coral.como")
'https://github.com/jmchandonia/CORAL'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("coral.como")
'https://github.com/jmchandonia/CORAL'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("coral.como")
'https://raw.githubusercontent.com/jmchandonia/CORAL/refs/heads/main/example/pedometer/ontologies/context_measurement_ontology.obo'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("coral.como")
'John-Marc Chandonia'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("coral.como")
'JMChandonia@lbl.gov'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("coral.como")
'jmchandonia'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("coral.como")
'0000-0002-5153-9079'