Contains identifiers of cohesin binding sites in human cells from CohesinDB. CohesinDB includes 2043 epigenomics, transcriptomics and 3D genomics datasets from 530 studies involving 176 cell types. Each cohesin object is annotated with locus, cell type, classification, function, 3D genomics and cis-regulatory information.

Prefix

cohesindb.binding

Keywords

binding site cohesin protein

Links

Homepage Request Discussion

Contact

Ryuichiro Nakato   0000-0003-3019-5817

Pattern for Local Unique Identifiers

Local identifiers in CohesinDB - cohesin site should match this regular expression:
^CDBP00\d{6}$

Example Local Unique Identifier

CDBP00415501   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from CohesinDB - cohesin site should match this regular expression:
^cohesindb\.binding:CDBP00\d{6}$

Example CURIE

cohesindb.binding:CDBP00415501

Publications

2023 CohesinDB: a comprehensive database for decoding cohesin-related epigenomes, 3D genomes and transcriptomes in human cells

Contributors

• submitter Maaya Manoj   0009-0000-6974-6386   maayamanoj466

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier CDBP00415501 is used to demonstrate the providers available for CohesinDB - cohesin site. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.