CIViC Molecular Profiles are combinations of one or more CIViC variants. Most Molecular Profiles are “Simple” Molecular Profiles comprised of a single variant. In most cases, these can be considered equivalent to the CIViC concept of a Variant. However, increasingly clinical significance must be considered in the context of multiple variants simultaneously. Complex Molecular Profiles in CIViC allow for curation of such variant combinations. Regardless of the nature of the Molecular Profile (Simple or Complex), it must have a Predictive, Prognostic, Predisposing, Diagnostic, Oncogenic, or Functional clinical relevance to be entered in CIViC.

Prefix

civic.mpid

Alternative Prefixes

civic.molecularprofile

License

CC0-1.0

Links

Homepage Mailing List

Contact

Malachi Griffith   0000-0002-6388-446X   malachig

Pattern for Local Unique Identifiers

Local identifiers in CIViC Molecular Profile should match this regular expression:
^[0-9]+$

Example Local Unique Identifier

559   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from CIViC Molecular Profile should match this regular expression:
^civic\.mpid:[0-9]+$

Example CURIE

civic.mpid:559

The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 559 is used to demonstrate the providers available for CIViC Molecular Profile. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.