Registry Chromosome Ontology

Suggest

The Chromosome Ontology is an automatically derived ontology of chromosomes and chromosome parts.

Prefix

chr

Preferred Prefix

CHR

Keywords

ontology

License

BSD-3

Links

Homepage Repository OBO OWL OBO JSON Request Discussion

Contact

Chris Mungall 0000-0002-6601-2165 cmungall

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

10090-chr10qC

Example CURIE

CHR:10090-chr10qC

Contributors

submitter Harry Caufield 0000-0001-5705-7831 caufieldjh

Reviewer

Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Metaregistry Chromosome Ontology

The metaregistry provides mappings between the Semantic Farm and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`CHR`
BioContext	`biocontext`	`CHR`
BioPortal	`bioportal`	`CHR`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

This resource does not have any providers. Please consider contributing one after reading the curation guide.

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("chr")
'Chromosome Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("chr")
'BSD-3'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("chr")
'https://github.com/monarch-initiative/monochrom'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("chr")
'https://github.com/monarch-initiative/monochrom'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("chr")
'https://raw.githubusercontent.com/monarch-initiative/monochrom/refs/heads/master/chr.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("chr")
'https://raw.githubusercontent.com/monarch-initiative/monochrom/refs/heads/master/chr.owl'

Get the JSON download link:

>>> import bioregistry as br
>>> br.get_json_download("chr")
'https://raw.githubusercontent.com/monarch-initiative/monochrom/refs/heads/master/chr.json'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("chr")
'Chris Mungall'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("chr")
'cjmungall@lbl.gov'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("chr")
'cmungall'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("chr")
'0000-0002-6601-2165'