Registry ChEBI Integrated Role Ontology

CHEBI provides a distinct role hierarchy. Chemicals in the structural hierarchy are connected via a 'has role' relation. CHIRO provides links from these roles to useful other classes in other ontologies. This will allow direct connection between chemical structures (small molecules, drugs) and what they do. This could be formalized using 'capable of', in the same way Uberon and the Cell Ontology link structures to processes.

Prefix: chiro
Preferred Prefix: CHIRO
Keywords: obo ontology
Version: 2015-11-23
License: CC0-1.0
Links: Homepage Repository OBO OWL
Contact: Nicole Vasilevsky 0000-0001-5208-3432 nicolevasilevsky
Pattern for Local Unique Identifiers: No terms in chiro
Example Local Unique Identifier: No Terms in chiro
Publications: 2020 Extension of Roles in the ChEBI Ontology

Ontology

A summary of the relations in the Semantic Farm schema can be found here.

Depends On (7) (bioregistry.schema:0000017 ): CHEBI GO HP MP NCBITaxon PR UBERON
In Collection: NFDI4Chem Collection

Metaregistry ChEBI Integrated Role Ontology

The metaregistry provides mappings between the Semantic Farm and other registries. There are 6 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`CHIRO`
BioPortal	`bioportal`	`CHIRO`
OBO Foundry	`obofoundry`	`chiro`
OLS	`ols`	`chiro`
OntoBee	`ontobee`	`CHIRO`
Wikidata (E)	`wikidata.entity`	`Q113006226`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/CHIRO_$1

Get the version:

>>> import bioregistry as br
>>> br.get_version("chiro")
'2015-11-23'

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("chiro")
'ChEBI Integrated Role Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("chiro")
'CC0-1.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("chiro")
'https://github.com/obophenotype/chiro'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("chiro")
'https://github.com/obophenotype/chiro'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("chiro")
'http://purl.obolibrary.org/obo/chiro.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("chiro")
'http://purl.obolibrary.org/obo/chiro.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("chiro")
'Nicole Vasilevsky'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("chiro")
'vasilevs@ohsu.edu'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("chiro")
'nicolevasilevsky'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("chiro")
'0000-0001-5208-3432'