Registry Comparative Data Analysis Ontology

a formalization of concepts and relations relevant to evolutionary comparative analysis

Prefix: cdao
Preferred Prefix: CDAO
Keywords: bioinformatics biomedical science evolution evolutionary biology life science molecular biology obo ontology phylogenetics taxonomy
Version: 2024-01-25
License: CC0-1.0
Links: Homepage Repository OWL
Contact: Jim Balhoff 0000-0002-8688-6599 balhoff
Pattern for Local Unique Identifiers: Local identifiers in Comparative Data Analysis Ontology should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000072 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Comparative Data Analysis Ontology should match this regular expression:
^CDAO:\d{7}$
Example CURIE: CDAO:0000072
Publications: 2009 Initial implementation of a comparative data analysis ontology

Metaregistry Comparative Data Analysis Ontology

The metaregistry provides mappings between the Semantic Farm and other registries. There are 9 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`CDAO`
AgroPortal	`agroportal`	`CDAO`
BioContext	`biocontext`	`CDAO`
BioPortal	`bioportal`	`CDAO`
FAIRSharing	`fairsharing`	`FAIRsharing.kay31r`
OBO Foundry	`obofoundry`	`cdao`
OLS	`ols`	`cdao`
OntoBee	`ontobee`	`CDAO`
Wikidata (E)	`wikidata.entity`	`Q55118328`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/CDAO_$1

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000072 is used to demonstrate the providers available for Comparative Data Analysis Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Comparative Data Analysis Ontology	`cdao`	http://purl.obolibrary.org/obo/CDAO_0000072
Comparative Data Analysis Ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/CDAO_0000072
Bioregistry	`bioregistry`	https://bioregistry.io/cdao:0000072
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/CDAO_0000072
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/cdao/terms?iri=http://purl.obolibrary.org/obo/CDAO_0000072
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/CDAO/?p=classes&conceptid=http://purl.obolibrary.org/obo/CDAO_0000072

Get the version:

>>> import bioregistry as br
>>> br.get_version("cdao")
'2024-01-25'

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("cdao")
'Comparative Data Analysis Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("cdao")
'CC0-1.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("cdao")
'https://github.com/evoinfo/cdao'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("cdao")
'https://github.com/evoinfo/cdao'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("cdao")
'http://purl.obolibrary.org/obo/cdao.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("cdao")
'Jim Balhoff'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("cdao")
'balhoff@renci.org'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("cdao")
'balhoff'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("cdao")
'0000-0002-8688-6599'