Registry Cancer Cell Line Encyclopedia Cells

Suggest

Logo for Cancer Cell Line Encyclopedia Cells

Datasets around different cancer cell lines generated by the Broad Institute and Novartis

Prefix

ccle

Alternative Prefixes

ccle.cell

Keywords

cancer cell line cell cell line

License

ODbL-1.0

Links

Homepage

Contact

William R. Sellers 0000-0002-3539-9803

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

BT20_BREAST Resolve

Example CURIE

ccle:BT20_BREAST

Publications

Contributors

submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Metaregistry Cancer Cell Line Encyclopedia Cells

The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix	Curate
Cellosaurus	`cellosaurus`	`CCLE`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier BT20_BREAST is used to demonstrate the providers available for Cancer Cell Line Encyclopedia Cells. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Cancer Cell Line Encyclopedia Cells	`ccle`	https://www.cbioportal.org/patient?studyId=ccle_broad_2019&caseId=BT20_BREAST
Bioregistry	`bioregistry`	https://bioregistry.io/ccle:BT20_BREAST

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("ccle.cell")
'ccle'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("ccle")
{'ccle.cell'}

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("ccle")
'Cancer Cell Line Encyclopedia Cells'

Get the license:

>>> import bioregistry as br
>>> br.get_license("ccle")
'ODbL-1.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("ccle")
'https://www.cbioportal.org/study/summary?id=ccle_broad_2019'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("ccle")
'William R. Sellers'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("ccle")
'wsellers@broadinstitute.org'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("ccle")
'0000-0002-3539-9803'