The Bioregistry is integrative meta-registry of biological databases, ontologies, and nomenclatures that is backed by an open database.

Prefix

bioregistry

Links

Homepage Repository @bioregistry@fosstodon.org

Publications

2022 Unifying the Identification of Biomedical Entities with the Bioregistry

Pattern for Local Unique Identifiers

Local identifiers in Bioregistry should match this regular expression:
^[A-Za-z_][A-Za-z0-9\.\-_]*$

Example Local Unique Identifier

bioregistry   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Bioregistry should match this regular expression:
^bioregistry:[A-Za-z_][A-Za-z0-9\.\-_]*$

Example CURIE

bioregistry:bioregistry

Contact

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

Contributors

submitter Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A summary of the relations in the Semantic Farm schema can be found here.

In Collection

MaRDI Collection BERD@NFDI Collection NFDI4DataScience Collection NFDI4Earth Collection NFDI-MatWerk Collection PUNCH4NFDI Collection FAIRagro Collection NFDI4BIOIMAGE Collection NFDIxCS Collection NFDI4Objects Collection NFDI4Memory Collection Text+ Collection GHGA Collection NFDI4Biodiversity Collection NFDI4Health Collection NFDI4Microbiota Collection NFDI4Immuno Collection

The metaregistry provides mappings between the Semantic Farm and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier bioregistry is used to demonstrate the providers available for Bioregistry. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.