BioGRID is a database of physical and genetic interactions in Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster, Homo sapiens, and Schizosaccharomyces pombe.

Prefix

biogrid

Keywords

biochemistry bioinformatics chemical biology cheminformatics gene interaction life science protein proteomics systems biology

Links

Homepage Repository

Publications

2020 The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions

2019 The BioGRID interaction database: 2019 update

2010 The BioGRID Interaction Database: 2011 update

2006 BioGRID: a general repository for interaction datasets

2003 The GRID: the General Repository for Interaction Datasets

Pattern for Local Unique Identifiers

Local identifiers in BioGRID should match this regular expression:
^\d+$

Example Local Unique Identifier

31623   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from BioGRID should match this regular expression:
^biogrid:\d+$

Example CURIE

biogrid:31623

Contact

Mike Tyers   0000-0002-9713-9994

A summary of the relations in the Semantic Farm schema can be found here.

In Collection

Synapse.org external links

The metaregistry provides mappings between the Semantic Farm and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 31623 is used to demonstrate the providers available for BioGRID. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.