AntiFam is a database of spurious protein families that have been removed from Pfam due to incorrect hidden Markov model prediction.

Prefix

antifam

Keywords

family and domain databases

Links

Homepage Request Discussion

Publications

2012 AntiFam: a tool to help identify spurious ORFs in protein annotation

Pattern for Local Unique Identifiers

Local unique identifiers in AntiFam should match this regular expression:
^ANF\d{5}$

Example Local Unique Identifier

ANF00001   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from AntiFam should match this regular expression:
^antifam:ANF\d{5}$

Example CURIE

antifam:ANF00001

Contact

Alex Bateman   0000-0002-6982-4660   bateman-research

Identifier Space Owner

European Bioinformatics Institute

Contributor

creator Benjamin M. Gyori   0000-0001-9439-5346   bgyori

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A summary of the relations in the Semantic Farm schema can be found here.

In Collection (1)

Biocuration Conference 2025 Collection

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier ANF00001 is used to demonstrate the providers available for AntiFam. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.