AceView provides a curated sequence representation of all public mRNA sequences (mRNAs from GenBank or RefSeq, and single pass cDNA sequences from dbEST and Trace). These are aligned on the genome and clustered into a minimal number of alternative transcript variants and grouped into genes. In addition, alternative features such as promoters, and expression in tissues is recorded. This collection references C. elegans genes and expression.

Prefix

aceview.worm

Keywords

dna gene rna

Links

Homepage

Contact

Danielle Thierry-Mieg   0000-0001-9568-4211

Pattern for Local Unique Identifiers

Local identifiers in Aceview Worm should match this regular expression:
^[a-z0-9-]+$

Example Local Unique Identifier

aap-1   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Aceview Worm should match this regular expression:
^aceview\.worm:[a-z0-9-]+$

Example CURIE

aceview.worm:aap-1

Publications

2006 AceView: a comprehensive cDNA-supported gene and transcripts annotation

The metaregistry provides mappings between the Semantic Farm and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier aap-1 is used to demonstrate the providers available for Aceview Worm. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.