The miRBase Sequence Database is a searchable database of published miRNA sequences and annotation. This collection refers specifically to the mature miRNA sequence.

Prefix

mirbase.mature

Alternative Prefixes

MIRBASEM

Keywords

nucleotide ontology sequence transcript

License

public-domain

Links

Homepage OBO OWL OBO JSON Part of mirbase

References

GitHub Issue https://github.com/biopragmatics/bioregistry/issues/2189

Pattern for Local Unique Identifiers

Local unique identifiers in miRBase mature miRNA should match this regular expression:
^MIMAT\d{7}$

Example Local Unique Identifier

MIMAT0046872   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from miRBase mature miRNA should match this regular expression:
^mirbase\.mature:MIMAT\d{7}$

Example CURIE

mirbase.mature:MIMAT0046872

Contact

Sam Griffiths-Jones   0000-0001-6043-807X   samgriffithsjones

Contributor

contributor Javier Millán Acosta   0000-0002-4166-7093   jmillanacosta

Mappings from records in Semantic Farm to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MIMAT0046872 is used to demonstrate the providers available for miRBase mature miRNA. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Semantic Farm are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.